Package: bseqsc
Type: Package
Title: Deconvolution of Bulk Sequencing Experiments using Single Cell Data
Version: 1.0
Date: 2017-03-13
Author: Renaud Gaujoux, Maayan Baron
Authors@R: c( person("Renaud", "Gaujoux", role=c('aut', 'cre'), email='renaud@tx.technion.ac.il'), 
    person("Maayan", "Baron", role = "aut", email = 'maayan.baron@nyumc.org')) 
Maintainer: Renaud Gaujoux <renaud@tx.technion.ac.il>
Description: Companion package to:
  A single-cell transcriptomic map of the human and mouse pancreas reveals 
  inter- and intra-cell population structure. Baron et al. Cell Systems (2016)
  https://www.ncbi.nlm.nih.gov/pubmed/27667365
License: GPL (>= 2)
LazyData: true
Depends: R (>= 3.3.2), csSAM (>= 1.4)
Imports:
	Biobase, 
	plyr, 
	abind, 
	pkgmaker, 
	stringr, 
	openxlsx, 
	xbioc,
	rngtools, 
	ggplot2,
	dplyr,
	scales, 
	AnnotationDbi, 
	NMF,
	e1071,
	parallel,
	preprocessCore,
	edgeR
Suggests: 
	BiocStyle, 
	knitr, 
	rmarkdown
Remotes:
	renozao/xbioc,
	shenorrlab/csSAM,
	renozao/NMF
VignetteBuilder: knitr
biocViews: SingleCell 
RoxygenNote: 6.0.0.9000
Roxygen: list(markdown = TRUE, roclets = c('collate', 'namespace', 'roclets::rd2_roclet'))

